Contribution to a conference proceedings/Journal Article

PUBDB-2024-06687

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Machine learning for the reconstruction and analysis of synchrotron-radiation tomography data

Moosmann, J. (Corresponding author)HZG*Hereon* ; Ahrens, J.DESY* ; Irvine, S.Extern* ; Wong, T.Extern*Hereon* ; Lucas, C.Extern* ; Beckmann, F.HZG*Hereon* ; Hammel, J. U.HZG*Hereon* ; Wieland, F.Extern*HZG*Hereon*EMBL* ; Zeller-Plumhoff, B.HZG*Hereon* ; Heuser, P. (Corresponding author)DESY* ; Müller, B. (Editor)Extern* ; Wang, G. (Editor)

2024
SPIE Bellingham, Wash.

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Please use a persistent id in citations: doi:10.1117/12.3028018  doi:10.3204/PUBDB-2024-06687

Abstract: The Helmholtz-Zentrum Hereon is operating imaging beamlines for X-ray tomography (P05 IBL, P07 HEMS) for academic and industrial users at the synchrotron-radiation source PETRA III at DESY in Hamburg, Germany. The high flux density and coherence of synchrotron radiation enable high-resolution in situ/operando/in vivo tomography experiments and phase-contrast imaging techniques, respectively. Large amounts of 3D and 4D data are collected that are difficult to process and analyze. Recently, we have explored machine learning approaches for the reconstruction, processing and analysis of synchrotron-radiation tomography data. Here, we report on the application of supervised learning for multimodal data analysis to generate a virtual 3D histology, digital volume correlation of 4D in situ tomography data, and instance segmentation. Furthermore, we present findings related to unsupervised learning in the context of semantic segmentation.

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Contributing Institute(s):

1. Helmholtz-Zentrum Hereon (Hereon)
2. DOOR-User (DOOR ; HAS-User)
3. Informationstechnologie (IT)

Research Program(s):

1. 623 - Data Management and Analysis (POF4-623) (POF4-623)
2. 6G3 - PETRA III (DESY) (POF4-6G3) (POF4-6G3)
3. FS-Proposal: I-20160104 (I-20160104) (I-20160104)
4. FS-Proposal: II-20170009 (II-20170009) (II-20170009)
5. FS-Proposal: I-20170074 (I-20170074) (I-20170074)
6. FS-Proposal: I-20180109 (I-20180109) (I-20180109)
7. FS-Proposal: I-20180842 EC (I-20180842-EC) (I-20180842-EC)
8. FS-Proposal: I-20191467 (I-20191467) (I-20191467)
9. FS-Proposal: I-20190205 (I-20190205) (I-20190205)

Experiment(s):

1. PETRA Beamline P05 (PETRA III)
2. PETRA Beamline P07 (PETRA III)

Appears in the scientific report 2024

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Database coverage:
; ; National-Konsortium ; SCOPUS

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