Preprint PUBDB-2023-07149

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Observation of a single protein by ultrafast X-ray diffraction

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2023

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Abstract: The idea of using ultrashort X-ray pulses to obtain images of single proteins frozen in time has fascinated and inspired many. It was one of the arguments for building X-ray free-electron lasers. According to theory1, the extremely intense pulses provide sufficient signal to dispense with using crystals as an amplifier, and the ultrashort pulse duration permits capturing the diffraction data before the sample inevitably explodes2. This was first demonstrated on biological samples a decade ago on the giant mimivirus3. Since then a large collaboration4 has been pushing the limit of the smallest sample that can be imaged5,6. The ability to capture snapshots on the timescale of atomic vibrations, while keeping the sample at room temperature, may allow probing the entire conformational phase space of macromolecules. Here we show the first observation of an X-ray diffraction pattern from a single protein, that of Escherichia coli GroEL which at 14 nm in diameter7 is the smallest biological sample ever imaged by X-rays, and demonstrate that the concept of diffraction before destruction extends to single proteins. From the pattern, it is possible to determine the approximate orientation of the protein. Our experiment demonstrates the feasibility of ultrafast imaging of single proteins, opening the way to single-molecule time-resolved studies on the femtosecond timescale.


Note: The paper is accepted for publication in Light: Science & Applications but not published yet. Information from Amit Samanta.

Contributing Institute(s):
  1. CFEL-CMI (FS-CFEL-CMI)
  2. CFEL-Coherent X-Ray Imaging (FS-CFEL-1)
  3. beauftragt von UNI (UNI/CUI)
  4. Uni Hamburg / Experimentalphysik (UNI/EXP)
  5. FS-Photon Science (FS-PS)
Research Program(s):
  1. 633 - Life Sciences – Building Blocks of Life: Structure and Function (POF4-633) (POF4-633)
  2. DFG project 390715994 - EXC 2056: CUI: Advanced Imaging of Matter (390715994) (390715994)
  3. COMOTION - Controlling the Motion of Complex Molecules and Particles (614507) (614507)
  4. Leibniz Preis - Leibiz Programm 2015: Prof. Dr. Henry N. Chapman (DFG-Leibniz-2015-Chapman) (DFG-Leibniz-2015-Chapman)
  5. DFG project 194651731 - EXC 1074: Hamburger Zentrum für ultraschnelle Beobachtung (CUI): Struktur, Dynamik und Kontrolle von Materie auf atomarer Skala (194651731) (194651731)
Experiment(s):
  1. Experiments at XFEL
  2. Experiments at CFEL

Appears in the scientific report 2023
Database coverage:
Creative Commons Attribution CC BY 4.0 ; OpenAccess ; Published
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Private Collections > >DESY > >FS > FS-CFEL-CMI
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Private Collections > >DESY > >FS > FS-PS
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Observation of a single protein by ultrafast X-ray diffraction
Light 13(1), 15 () [10.1038/s41377-023-01352-7]  GO OpenAccess  Download fulltext Files BibTeX | EndNote: XML, Text | RIS


 Record created 2023-11-23, last modified 2025-07-24


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