Record #408174

HRSF-0002

New avenues in information and data science: advanced imaging applications at the XFEL and cryo-EM frontier

Coordinator	Vartaniants, Ivan
Grant period	2018-2020
Funding body	Helmholtz Gemeinschaft Deutscher Forschungszentren
	HGF
Identifier	G:(DE-HGF)2018_HRSF-0002

⇧ Impuls- und Vernetzungsfonds ⇧

Note: In the frame of this Project we are planning to provide analysis of the data flow that is obtained on the facilities providing the structure of the single nanosize particles in a quasi-real time. The analysis of the data flow will be provided by the high performance data processing platform, which will be developed in the frame of this Project. The main experimental facility for which the computing platform will be developed is the European XFEL. The platform will be adapted and applied as weil for the analysis of data from the cryogenic electron microscopy (cryo-EM). State of the art machine learning algorithms and artificial intelligence methods will be used. The main advantage of this platform will be the complete processing pipeline from the experiment to the reconstructed 30 structure. When implemented, this platform will allow to determine structure of the single particles in interactive regime.

Recent Publications

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Journal Article Assalauova, D.XFEL.EU*DESY* ; Kim, Y. Y.XFEL.EU*DESY* ; Bobkov, S. ; Khubbutdinov, R. ; Rose, M.Extern*XFEL.EU* ; Alvarez, R. ; Andreasson, J. ; Balaur, E. ; Contreras, A. ; DeMirci, H. ; Gelisio, L. ; Hajdu, J. ; Hunter, M. S. ; Kurta, R. P. ; Li, H. ; McFadden, M. ; Nazari, R. ; Schwander, P. ; Teslyuk, A. ; Walter, P. ; Xavier, P. L. ; Yoon, C. H. ; Zaare, S. ; Ilyin, V. A. ; Kirian, R. A. ; Hogue, B. G. ; Aquila, A. (Corresponding author) ; Vartanyants, I. A.XFEL.EU*DESY*
Corrigendum: An advanced workflow for single-particle imaging with the limited data at an X-ray free-electron laser
IUCrJ 9(2), 328 (2022) [10.1107/S2052252522000501]2022 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Preprint Sobolev, E. ; Zolotarev, S.XFEL.EU* ; Giewekemeyer, K.Extern*XFEL.EU* ; et al
Megahertz single-particle imaging at the European XFEL
[10.3204/PUBDB-2024-01862] OpenAccess Files Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Report Vartaniants, I. (Corresponding author)DESY*
Annual Report 2019 [HRSF-0002]
15 pp. (2020) [10.3204/PUBDB-2020-04021]2020 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Assalauova, D.XFEL.EU*DESY* ; Kim, Y. Y.XFEL.EU*DESY* ; Bobkov, S. ; Khubbutdinov, R.XFEL.EU*DESY* ; Rose, M.Extern*XFEL.EU* ; Alvarez, R.Extern*XFEL.EU* ; Andreasson, J.Extern* ; Balaur, E.Extern*XFEL.EU* ; Contreras, A. ; DeMirci, H.Extern*XFEL.EU* ; Gelisio, L. ; Hajdu, J.Extern* ; Hunter, M. S.XFEL.EU* ; Kurta, R. P.XFEL.EU* ; Li, H. ; McFadden, M. ; Nazari, R. ; Schwander, P.Extern*XFEL.EU* ; Teslyuk, A. ; Walter, P. ; Xavier, P. L. ; Yoon, C. H.Extern* ; Zaare, S. ; Ilyin, V. A. ; Kirian, R.Extern*XFEL.EU* ; Hogue, B. G. ; Aquila, A.Extern* ; Vartanyants, I. A. (Corresponding author)XFEL.EU*DESY*
An advanced workflow for single particle imaging with the limited data at an X-ray free-electron laser
IUCrJ 7(6), 1102 - 1113 (2020) [10.1107/S2052252520012798]2020 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Sobolev, E. ; Zolotarev, S.Extern* ; Giewekemeyer, K.Extern*XFEL.EU* ; et al
Megahertz single-particle imaging at the European XFEL
Communications Physics 3(1), 97 (2020) [10.1038/s42005-020-0362-y]2020 OpenAccess Files Fulltext by arXiv.org BibTeX | EndNote: XML, Text | RIS

Report Vartaniants, I. (Corresponding author)DESY*
Annual Report 2018 [HRSF-0002]
13 pp. (2019) [10.3204/PUBDB-2019-04844]2019 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

Journal Article Wiedorn, M. O. (Corresponding author)CFEL* ; Oberthür, D.CFEL*DESY* ; Bean, R.XFEL.EU* ; et al
Megahertz serial crystallography
Nature Communications 9(1), 4025 (2018) [10.1038/s41467-018-06156-7]2018 OpenAccess Files BibTeX | EndNote: XML, Text | RIS

All known publications ...
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Record created 2018-07-26, last modified 2019-05-24

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