Preprint PUBDB-2022-04572

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Active site assembly of [NiFe]-hydrogenase scrutinized on the basis of purified maturation intermediates

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2022

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Abstract: [NiFe]-hydrogenases are biotechnologically relevant enzymes catalyzing the reversible splitting of H$_2$ into 2 e$^- $ and 2 H$^+$ under ambient conditions. Catalysis takes place at the heterobimetallic NiFe(CN)$_2$(CO) center, whose multistep biosynthesis involves careful handling of two transition metals as well as potentially harmful CO and CN$^–$ molecules. Herein, we investigated the sequential assembly of the [NiFe]-cofactor, previously based on primarily indirect evidence, using four different purified maturation intermediates of the catalytic subunit, HoxG, of the O$_2$-tolerant membrane-bound hydrogenase from Cupriavidus necator. These included the cofactor-free apo-HoxG, a nickel-free version carrying only the Fe(CN)$_2$(CO) fragment, a precursor that contained all cofactor components but remained redox-inactive, and the fully mature HoxG. Through biochemical analyses combined with comprehensive spectroscopic investigation using infrared, electronic paramagnetic resonance, Mössbauer, X-ray absorption, and nuclear resonance vibrational spectroscopies, we obtained detailed insight into the sophisticated maturation process of [NiFe]-hydrogenase.


Note: Funding:Einstein Foundation Berlin: grant number EVF-2016-277;SPP 1927 “Iron Sulfur for Life”: grants: DE1877/1-1 and 311062227;Use of the Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, was supported by the U.S. Department of Energy, Office of Science, Office of Basic Energy Sciences under Contract No. DE-AC02-76SF00515

Contributing Institute(s):
  1. DOOR-User (DOOR ; HAS-User)
  2. Experimentebetreuung PETRA III (FS-PET-S)
Research Program(s):
  1. 632 - Materials – Quantum, Complex and Functional Materials (POF4-632) (POF4-632)
  2. 6G3 - PETRA III (DESY) (POF4-6G3) (POF4-6G3)
  3. TIMB3 - Twin to Illuminate Metals in Biology and Biocatalysis through Biospectroscopy (810856) (810856)
  4. G:(GEPRIS)390540038 - EXC 2008: Unifying Systems in Catalysis "UniSysCat" (390540038) (390540038)
  5. FS-Proposal: I-20200452 (I-20200452) (I-20200452)
Experiment(s):
  1. PETRA Beamline P01 (PETRA III)

Appears in the scientific report 2022
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Creative Commons Attribution-NonCommercial-NoDerivs CC BY-NC-ND 4.0 ; OpenAccess
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 Record created 2022-08-26, last modified 2025-07-24


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