Journal Article

DESY-2014-02415

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png RNA secondary structure diagrams for very large molecules: RNAfdl

Hecker, N. (Corresponding Author) ; Wiegels, T.Extern*>EMBL* ; Torda, A. E.

2013
Oxford University Press Oxford

This record in other databases:        

Please use a persistent id in citations: doi:10.1093/bioinformatics/btt496  doi:10.3204/DESY-2014-02415

Abstract: There are many programs that can read the secondary structure of an RNA molecule and draw a diagram, but hardly any that can cope with 10(3) bases. RNAfdl is slow but capable of producing intersection-free diagrams for ribosome-sized structures, has a graphical user interface for adjustments and produces output in common formats. Availability and implementation: Source code is available under the GNU General Public License v3.0 at http://sourceforge.net/projects/rnafdl for Linux and similar systems or Windows using MinGW. RNAfdl is implemented in C, uses the Cairo 2D graphics library and offers both command line and graphical user interfaces.

Note: (c) Author

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Contributing Institute(s):

1. EMBL (EMBL)

Research Program(s):

1. FS Beamline without reference (POF2-544) (POF2-544)

Experiment(s):

1. Unknown DESY Beamline

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Database coverage:
; ; ; Allianz-Lizenz / DFG ; BIOSIS Previews ; Current Contents - Life Sciences ; JCR ; NCBI Molecular Biology Database ; Nationallizenz ; SCOPUS ; Science Citation Index ; Science Citation Index Expanded ; Thomson Reuters Master Journal List ; Web of Science Core Collection

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