Preprint

PUBDB-2024-01943

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Laser-induced alignment of nanoparticles and macromolecules for single-particle-imaging applications

Amin, M.CFEL*Extern*DESY* ; Hartmann, J.-M. ; Samanta, A. K.CFEL*XFEL.EU*DESY* ; Küpper, J. (Corresponding author)CFEL*XFEL.EU*DESY*

2023

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Please use a persistent id in citations: doi:10.3204/PUBDB-2024-01943

Report No.: arXiv:2306.05870

Abstract: Laser-induced alignment of particles and molecules was long envisioned to support three-dimensional structure determination using single-particle imaging with x-ray free-electron lasers [PRL 92, 198102 (2004)]. However, geometric alignment of isolated macromolecules has not yet been demonstrated. Using molecular modeling, we analyzed and demonstrated how the alignment of large nanorods and proteins is possible with standard laser technology, and performed a comprehensive analysis on the dependence of the degree of alignment on molecular properties and experimental details. Calculations of the polarizability anisotropy of about 150,000 proteins yielded a skew-normal distribution with a location of 1.2, which reveals that most of these proteins can be aligned using appropriate, realistic experimental parameters. Moreover, we explored the dependence of the degree of alignment on experimental parameters such as particle temperature and laser-pulse energy.

Note: Please link this preprint with journal entry https://bib-pubdb1.desy.de/record/585553, when published

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Contributing Institute(s):

1. CFEL-CMI (FS-CFEL-CMI)
2. beauftragt von UNI (UNI/CUI)
3. Uni Hamburg / Experimentalphysik (UNI/EXP)

Research Program(s):

1. 631 - Matter – Dynamics, Mechanisms and Control (POF4-631) (POF4-631)
2. DFG project 390715994 - EXC 2056: CUI: Advanced Imaging of Matter (390715994) (390715994)
3. COMOTION - Controlling the Motion of Complex Molecules and Particles (614507) (614507)

Experiment(s):

1. No specific instrument

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