CSSB-LIV/UKE-MT

⇧ Centre for Structural Systems Biology ⇧

Recent Publications

All known publications ...
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http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Mulvaney, T.Extern*CSSB* ; Kryshtafovych, A. ; Topf, M. (Corresponding author)Extern*CSSB*
Cryo‐ EM Analysis in CASP16
Proteins 94(1), 447 - 459 (2025) [10.1002/prot.70099]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Genz, L. R.Extern*CSSB* ; Nair, S. ; Nagar, N. ; Topf, M. (Corresponding author)Extern*CSSB*
Assessing scoring metrics for AlphaFold2 and AlphaFold3 protein complex predictions
Protein science 34(11), e70327 (2025) [10.1002/pro.70327]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Jadhav, S. ; Maiorca, M.Extern*CSSB* ; Manigrasso, J. ; Saha, S. ; Rakitch, A. ; Muscat, S. ; Mulvaney, T.Extern*CSSB* ; De Vivo, M. (Corresponding author) ; Topf, M. (Corresponding author)Extern*CSSB* ; Marcia, M. (Corresponding author)
Dynamic assembly of a large multidomain ribozyme visualized by cryo-electron microscopy
Nature Communications 16(1), 10195 (2025) [10.1038/s41467-025-65502-8]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Kryshtafovych, A. ; Schwede, T. ; Topf, M.Extern*CSSB* ; Fidelis, K. ; Moult, J. (Corresponding author)
Progress and Bottlenecks for Deep Learning in Computational Structure Biology: CASP Round XVI
Proteins 94(1), 5 - 14 (2025) [10.1002/prot.70076]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Alexander, L. T. (Corresponding author) ; Follonier, O. M. ; Kryshtafovych, A. ; Abesamis, K. ; Bibi-Triki, S. ; Box, H. G. ; Breyton, C. ; Bringel, F. ; Carrique, L. ; d'Acapito, A. ; Dong, G. ; DuBois, R. ; Fass, D. ; Fiesco, J. M. ; Fox, D. R. ; Grimes, J. M. ; Grinter, R. ; Jenkins, M. ; Kamyshinsky, R. ; Keown, J. R. ; Lackner, G. ; Lammers, M. ; Liu, S. ; Lovering, A. L. ; Malinauskas, T. ; Masquida, B. ; Palm, G. J. ; Siebold, C. ; Su, T. ; Zhang, P. ; Zhou, Z. H. ; Fidelis, K. ; Topf, M.Extern*CSSB* ; Moult, J. ; Schwede, T.
Protein Target Highlights in CASP16 : Insights From the Structure Providers
Proteins 94(1), 25 - 50 (2025) [10.1002/prot.70025] special issue: "CASP16: Critical Assessment of methods for Structure Prediction, 16th round"2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Genz, L.Extern*CSSB* ; Nair, S.CSSB* ; Sweeney, A.CSSB* ; Topf, M. (Corresponding author)Extern*CSSB*
Drug targeting of protein-nucleic acid interactions
Current opinion in structural biology 95, 103165 (2025) [10.1016/j.sbi.2025.103165]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Vollmer, B.Extern*CSSB* ; Ebel, H. ; Rees, R. ; Nentwig, J. ; Mulvaney, T. ; Schünemann, J. ; Krull, J. ; Topf, M. ; Görlich, D. (Corresponding author) ; Gruenewald, K. (Corresponding author)CSSB*DESY*
A nanobody specific to prefusion glycoprotein B neutralizes HSV-1 and HSV-2
Nature 646(8084), 433 - 441 (2025) [10.1038/s41586-025-09438-5]2025     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Kleywegt, G. J. (Corresponding author) ; Adams, P. D. ; Butcher, S. J. ; Lawson, C. L. ; Rohou, A. ; Rosenthal, P. B. ; Subramaniam, S. ; Topf, M.Extern*CSSB* ; Abbott, S. ; Baldwin, P. R. ; Berrisford, J. M. ; Bricogne, G. ; Choudhary, P. ; Croll, T. I. ; Danev, R. ; Ganesan, S. J. ; Grant, T. ; Gutmanas, A. ; Henderson, R. ; Heymann, J. B. ; Huiskonen, J. T. ; Istrate, A. ; Kato, T. ; Lander, G. C. ; Lok, S.-M. ; Ludtke, S. J. ; Murshudov, G. N. ; Pye, R. ; Pintilie, G. D. ; Richardson, J. S. ; Sachse, C. ; Salih, O. ; Scheres, S. H. W. ; Schroeder, G. F. ; Sorzano, C. O. S. ; Stagg, S. M. ; Wang, Z. ; Warshamanage, R. ; Westbrook, J. D. ; Winn, M. D. ; Young, J. Y. ; Burley, S. K. ; Hoch, J. C. ; Kurisu, G. ; Morris, K. ; Patwardhan, A. ; Velankar, S.
Community recommendations on cryoEM data archiving and validation
IUCrJ 11(2), 140-151 (2024) [10.1107/S2052252524001246]2024     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Beton, J. G.Extern*CSSB* ; Mulvaney, T.CSSB* ; Cragnolini, T.Extern*CSSB* ; Topf, M. (Corresponding author)Extern*CSSB*
Cryo-EM structure and B-factor refinement with ensemble representation
Nature Communications 15(1), 444 (2024) [10.1038/s41467-023-44593-1]2024     Files BibTeX | EndNote: XML, Text | RIS

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png Journal Article Del Moral-Morales, A. ; Sámano, C. ; Ocampo-Cervantes, J. A. ; Topf, M. ; Baumbach, J. ; Hernández, J. ; Torres-Arciga, K. ; González-Barrios, R. (Corresponding author) ; Soto-Reyes, E. (Corresponding author)
Key Proteins for Regeneration in A. mexicanum
Scientifica 2024(1), 5460694 (2024) [10.1155/2024/5460694]2024     Files BibTeX | EndNote: XML, Text | RIS

All known publications ...
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