% IMPORTANT: The following is UTF-8 encoded.  This means that in the presence
% of non-ASCII characters, it will not work with BibTeX 0.99 or older.
% Instead, you should use an up-to-date BibTeX implementation like “bibtex8” or
% “biber”.

@ARTICLE{Molodenskiy:631515,
      author       = {Molodenskiy, Dmitry and Maurer, Valentin J and Yu, Dingquan
                      and Chojnowski, Grzegorz and Bienert, Stefan and Tauriello,
                      Gerardo and Gilep, Konstantin and Schwede, Torsten and
                      Kosinski, Jan},
      title        = {{A}lpha{P}ulldown2—a general pipeline for high-throughput
                      structural modeling},
      journal      = {Bioinformatics},
      volume       = {41},
      number       = {3},
      issn         = {1367-4803},
      address      = {Oxford},
      publisher    = {Oxford Univ. Press},
      reportid     = {PUBDB-2025-02027},
      pages        = {btaf115},
      year         = {2025},
      abstract     = {AlphaPulldown2 streamlines protein structural modeling by
                      automating workflows, improving code adaptability, and
                      optimizing data management for large-scale applications. It
                      introduces an automated Snakemake pipeline, compressed data
                      storage, support for additional modeling backends like
                      UniFold and AlphaLink2, and a range of other improvements.
                      These upgrades make AlphaPulldown2 a versatile platform for
                      predicting both binary interactions and complex multi-unit
                      assemblies.},
      cin          = {CSSB-EMBL-JK},
      ddc          = {570},
      cid          = {I:(DE-H253)CSSB-EMBL-JK-20210701},
      pnm          = {899 - ohne Topic (POF4-899)},
      pid          = {G:(DE-HGF)POF4-899},
      experiment   = {EXP:(DE-MLZ)NOSPEC-20140101},
      typ          = {PUB:(DE-HGF)16},
      doi          = {10.1093/bioinformatics/btaf115},
      url          = {https://bib-pubdb1.desy.de/record/631515},
}