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@ARTICLE{Bobkov:456273,
      author       = {Bobkov, S. A. and Teslyuk, A. B. and Baymukhametov, T. N.
                      and Pichkur, E. B. and Chesnokov, Yu. M. and Assalauova, D.
                      and Poyda, A. A. and Novikov, A. M. and Zolotarev, S. I. and
                      Ikonnikova, K. A. and Velikhov, V. E. and Vartanyants, I. A.
                      and Vasiliev, A. L. and Ilyin, V. A.},
      title        = {{A}dvances in {M}odern {I}nformation {T}echnologies for
                      {D}ata {A}nalysis in {CRYO}-{EM} and {XFEL} {E}xperiments},
      journal      = {Crystallography reports},
      volume       = {65},
      number       = {6},
      issn         = {1562-689X},
      address      = {Heidelberg},
      publisher    = {Springer Science + Business Media},
      reportid     = {PUBDB-2021-01424},
      pages        = {1081 - 1092},
      year         = {2020},
      note         = {Waiting for fulltext},
      abstract     = {A new approach to the organization of data pipelining in
                      cryo-electron microscopy (Cryo-EM) and X-ray free-electron
                      laser (XFEL) experiments is presented. This approach, based
                      on the progress in information technologies (IT) due to the
                      development of containerization techniques, allows one to
                      separate user’s work at the application level from the
                      developments of IT experts at the system and middleware
                      levels. A user must only perform two simple operations: pack
                      application packages in containers and write a workflow with
                      data processing logic in a standard format. Some examples of
                      containerized workflows for Cryo-EM and XFEL experiments on
                      study of the spatial structure of single biological
                      nanoobjects (viruses, macromolecules, etc.) are discussed.
                      Examples of program codes for installing applied packages in
                      Docker containers and examples of applied workflows written
                      in the high-level language CWL are presented at the site of
                      the project. The examples have comments, which may help an
                      IT-inexperienced researcher to gain an idea of how to
                      organize Docker containers and form CWL workflows for
                      Cryo-EM and XFEL data pipelining.},
      cin          = {FS-PS},
      ddc          = {530},
      cid          = {I:(DE-H253)FS-PS-20131107},
      pnm          = {6214 - Nanoscience and Materials for Information Technology
                      (POF3-621)},
      pid          = {G:(DE-HGF)POF3-6214},
      experiment   = {EXP:(DE-MLZ)NOSPEC-20140101},
      typ          = {PUB:(DE-HGF)16},
      UT           = {WOS:000619514900040},
      doi          = {10.1134/S1063774520060085},
      url          = {https://bib-pubdb1.desy.de/record/456273},
}