Journal Article

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2024-04-24
16:34
DBCoverage [PUBDB-2024-01588] Journal Article
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Ym1 protein crystals promote type 2 immunity
eLife 12, RP90676 () [10.7554/eLife.90676]  GO
Spontaneous protein crystallization is a rare event, yet protein crystals are frequently found in eosinophil-rich inflammation. In humans, Charcot-Leyden crystals (CLCs) are made from galectin-10 (Gal10) protein, an abundant protein in eosinophils. [...]
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2024-04-24
16:22
[PUBDB-2024-01587] Journal Article
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Mechanisms of Allosteric Inhibition of Insulin-Regulated Aminopeptidase
Inhibition of Insulin-Regulated Aminopeptidase is being actively explored for the treatment of several human diseases and several classes of inhibitors have been developed although no clinical applications have been reported yet. Here, we combine enzymological analysis with x-ray crystallography to investigate the mechanism employed by two of the most studied inhibitors of IRAP, an aryl sulfonamide and a 2-amino-4H-benzopyran named HFI-419. [...]
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2024-04-24
16:05
[PUBDB-2024-01586] Journal Article
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Structures of complete extracellular receptor assemblies mediated by IL-12 and IL-23
Cell-surface receptor complexes mediated by pro-inflammatory interleukin (IL)-12 and IL-23, both validated therapeutic targets, are incompletely understood due to the lack of structural insights into their complete extracellular assemblies. Furthermore, there is a paucity of structural details describing the IL-12–receptor interaction interfaces, in contrast to IL-23–receptor complexes. [...]
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2024-04-24
15:04
[PUBDB-2024-01585] Journal Article
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Structure-Guided Design of a Highly Potent Partial RXR Agonist with Superior Physicochemical Properties
Retinoid X receptors (RXRs, NR2B1–3) hold therapeutic potential in oncology, neurodegeneration, and metabolic diseases, but traditional RXR agonists mimicking the natural ligand 9-cis retinoic acid exhibit poor physicochemical properties, pharmacokinetics, and safety profiles. Improved RXR ligands are needed to exploit RXR modulation as a promising therapeutic concept in various indications beyond its current role in second-line cancer treatment. [...]
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2024-04-24
14:23
[PUBDB-2024-01584] Journal Article
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Engineering a Plant Polyketide Synthase for the Biosynthesis of Methylated Flavonoids
Homoeriodictyol and hesperetin are naturally occurring O-methylated flavonoids with many health-promoting properties. They are produced in plants in low abundance and as complex mixtures of similar compounds that are difficult to separate. [...]
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2024-04-23
16:13
[PUBDB-2024-01571] Journal Article
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Combined In-Solution Fragment Screening and Crystallographic Binding-Mode Analysis with a Two-Domain Hsp70 Construct
Heat shock protein 70 (Hsp70) isoforms are key players in the regulation of protein homeostasis and cell death pathways and are therefore attractive targets in cancer research. Developing nucleotide-competitive inhibitors or allosteric modulators, however, has turned out to be very challenging for this protein family, and no Hsp70-directed therapeutics have so far become available. [...]
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2024-04-23
15:57
[PUBDB-2024-01570] Journal Article
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The role of CE16 exo-deacetylases in hemicellulolytic enzyme mixtures revealed by the biochemical and structural study of the novel TtCE16B esterase
Acetyl esterases belonging to the carbohydrate esterase family 16 (CE16) is a growing group of enzymes, with exceptional diversity regarding substrate specificity and regioselectivity. However, further insight into the CE16 specificity is required for their efficient biotechnological exploitation. [...]
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2024-04-23
15:48
OpenAccess [PUBDB-2024-01569] Journal Article
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Crystal structure of the tegument protein UL82 (pp71) from human cytomegalovirus
Protein science 33(3), e4915 () [10.1002/pro.4915]  GO
Human cytomegalovirus (HCMV) is an opportunistic pathogen that infects a majority of the world population. It may cause severe disease in immunocompromised people and lead to pregnancy loss or grave disabilities of the fetus upon congenital infection. [...]
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2024-04-23
15:40
[PUBDB-2024-01568] Journal Article
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Trypanosoma brucei Invariant Surface Glycoprotein 75 Is an Immunoglobulin Fc Receptor Inhibiting Complement Activation and Antibody-Mediated Cellular Phagocytosis
Various subspecies of the unicellular parasite Trypanosoma brucei cause sleeping sickness, a neglected tropical disease affecting millions of individuals and domestic animals. Immune evasion mechanisms play a pivotal role in parasite survival within the host and enable the parasite to establish a chronic infection. [...]
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2024-04-23
15:06
[PUBDB-2024-01566] Journal Article
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Activation of Thoeris antiviral system via SIR2 effector filament assembly
Nature 627(8003), 431 - 436 () [10.1038/s41586-024-07092-x]  GO
To survive bacteriophage (phage) infections, bacteria developed numerous anti-phage defence systems1,2,3,4,5,6,7. Some of them (for example, type III CRISPR–Cas, CBASS, Pycsar and Thoeris) consist of two modules: a sensor responsible for infection recognition and an effector that stops viral replication by destroying key cellular components8,9,10,11,12. [...]
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