# Coordinated Projects

 2022-09-2916:29 [PUBDB-2022-04982] Journal Article Graef, J. ; Ehrt, C. ; Diedrich, K. ; et al Searching Geometric Patterns in Protein Binding Sites and Their Application to Data Mining in Protein Kinase Structures Journal of medicinal chemistry 65(2), 1384 - 1395 (2022) [10.1021/acs.jmedchem.1c01046]   The ever-growing number of protein-ligand complex structures can give fundamental insights into protein functions and protein-ligand interactions, especially in the field of protein kinase research. The number of tools to mine this data for individually defined structural motifs is restricted due to the challenging task of developing efficient index structures for 3D data in relational databases. [...] External link: Fulltext 2022-09-2916:27 [PUBDB-2022-04981] Contribution to a conference proceedings/Contribution to a book Plambeck, S. ; Martino, G. ; Fey, G. Metrics for the Evaluation of Approximate Sequential Streaming Circuits 2021 24th Euromicro Conference on Digital System Design (DSD) : [Proceedings] - IEEE, 2021. - ISBN 978-1-6654-2703-6 - doi:10.1109/DSD53832.2021.000412021 24th Euromicro Conference on Digital System Design (DSD), PalermoPalermo, Italy, 1 Sep 2021 - 3 Sep 2021 IEEE 208-211 (2021) [10.1109/DSD53832.2021.00041]   The design of energy- and area-efficient systems is important for modern technology. One approach to increase these efficiencies is approximate computing. [...] External link: Fulltext 2022-09-2916:20 [PUBDB-2022-04980] Contribution to a conference proceedings/Contribution to a book Martino, G. ; Riener, H. ; Fey, G. Revisiting Explicit Enumeration for Exact Synthesis 2020 23rd Euromicro Conference on Digital System Design (DSD) : [Proceedings] - IEEE, 2020. - ISBN 978-1-7281-9535-3 - doi:10.1109/DSD51259.2020.000162020 23rd Euromicro Conference on Digital System Design (DSD), KranjKranj, Slovenia, 26 Aug 2020 - 28 Aug 2020 IEEE 29-34 (2020) [10.1109/DSD51259.2020.00016]   The problem of generating a minimal implementation of a given Boolean function is called exact synthesis. The parameter to be minimized is often the total number of gates used for the implementation. [...] External link: Fulltext 2022-09-2916:12 [PUBDB-2022-04979] Journal Article Ehrt, C. ; Krause, B. ; Schmidt, R. ; et al SMARTS.plus – A Toolbox for Chemical Pattern Design Molecular informatics 39(12), 2000216 - (2020) [10.1002/minf.202000216]   The number of publications concerning Pan-Assay Interference Compounds and related problematic structural motifs in screening libraries is constantly growing. In consequence, filter collections are merged, extended but also critically discussed. [...] External link: Fulltext 2022-09-2909:21 [PUBDB-2022-04964] Contribution to a conference proceedings/Contribution to a book Martino, G. ; Fey, G. Syntax-Guided Enumeration of Temporal Properties 2019 Forum for Specification and Design Languages (FDL) : [Proceedings] - IEEE, 2019. - ISBN 978-1-7281-4113-8 - doi:10.1109/FDL.2019.88768922019 Forum for Specification and Design Languages (FDL), SouthamptonSouthampton, United Kingdom, 2 Sep 2019 - 4 Sep 2019 IEEE (2019) [10.1109/FDL.2019.8876892]   We propose Syntax-Guided Property Enumeration, a method for automatically obtaining a set of short and readable temporal logic properties from sequential logic networks. Each property is a temporal logic formula which describes a relation between the primary inputs, the primary outputs, and the latches of the network over time. [...] Restricted: PDF PDF (PDFA); 2022-09-2909:15 [PUBDB-2022-04963] Contribution to a conference proceedings/Contribution to a book Fey, G. ; Ghasempouri, T. ; Jacobs, S. ; et al Design Understanding: From Logic to Specification 2018 IFIP/IEEE International Conference on Very Large Scale Integration (VLSI-SoC) : [Proceedings] - IEEE, 2018. - ISBN 978-1-5386-4756-1 - doi:10.1109/VLSI-SoC.2018.86447322018 IFIP/IEEE International Conference on Very Large Scale Integration (VLSI-SoC), VeronaVerona, Italy, 8 Oct 2018 - 10 Oct 2018 IEEE (2018) [10.1109/VLSI-SoC.2018.8644732]   We present an outline of the field of Design Understanding and summarize state-of-the-art research in deriving human-understandable knowledge in form of logic properties from an unknown design.. Restricted: PDF PDF (PDFA); 2022-01-0413:18 [PUBDB-2022-00016] Journal Article Zabołotny, W. M. ; Byszuk, A. P. ; Dementev, D. ; et al GBTX emulator for development and special versions of GBT-based readout chains [arXiv:2109.11591] 22nd International Workshop on Radiation Imaging Detectors, iWoRiD 2021, Meeting location, 27 Jun 2021 - 1 Jul 2021 Journal of Instrumentation 16(12), C12022 - (2021) [10.1088/1748-0221/16/12/C12022]   The GBTX ASIC is a standard solution for providing fast control and data readout for radiation detectors used in HEP experiments. However, it is subject to export control restrictions due to the usage of radiation-hard technology. [...] Restricted: PDF PDF (PDFA); 2021-11-1513:46 [PUBDB-2021-04488] Journal Article Aleksenskii, A. ; Bleuel, M. ; Bosak, A. ; et al Effect of Particle Sizes on the Efficiency of Fluorinated Nanodiamond Neutron Reflectors Nanomaterials 11(11), 3067 - (2021) [10.3390/nano11113067]   Over a decade ago, it was confirmed that detonation nanodiamond (DND) powders reflect very cold neutrons (VCNs) diffusively at any incidence angle and that they reflect cold neutrons quasi-specularly at small incidence angles. In the present publication, we report the results of a study on the effect of particle sizes on the overall efficiency of neutron reflectors made of DNDs [...] Restricted: PDF PDF (PDFA); 2021-10-0515:42 [PUBDB-2021-03975] Journal Article Acharya, A. ; Adhikary, H. ; Aduszkiewicz, A. ; et al Erratum to: Measurements of $\pi ^-$ production in $^7\hbox{Be}+{}^9\hbox{Be}$ collisions at beam momenta from 19A to 150 $A\,\text{ Ge } \text{V}/c$ in the NA61/SHINE experiment at the CERN SPS [arXiv:2010.01864] The European physical journal / C 81(2), 144 (1-3) (2021) [10.1140/epjc/s10052-021-08926-y]   The NA61/SHINE experiment at the CERN Super Proton Synchrotron (SPS) studies the onset of deconfinement in hadron matter by a scan of particle production in collisions of nuclei with various sizes at a set of energies covering the SPS energy range. This paper presents results on inclusive double-differential spectra, transverse momentum and rapidity distributions and mean multiplicities of $\pi ^\pm$, $K^\pm$, p and $\bar{p}$ produced in the 20% most central$^7$Be+$^9$Be collisions at beam momenta of 19A, 30A, 40A, 75A and 150A ${\mathrm{Ge} \mathrm{V}}\!/\!c$. [...] OpenAccess: PDF PDF (PDFA); 2021-10-0515:28 [PUBDB-2021-03974] Journal Article Acharya, A. ; Adhikary, H. ; Allison, K. K. ; et al Spectra and mean multiplicities of $\pi ^{-}$ in central${}^{40}$Ar+${}^{45}$Sc collisions at 13A, 19A, 30A, 40A, 75A and 150$A\,\text{ Ge }\text{ V }\!/\!\textit{c}$ beam momenta measured by the NA61/SHINE spectrometer at the CERN SPS [CERN-EP-2021-010; arXiv:2101.08494]   The physics goal of the strong interaction program of the NA61/SHINE experiment at the CERN Super Proton Synchrotron (SPS) is to study the phase diagram of hadronic matter by a scan of particle production in collisions of nuclei with various sizes at a set of energies covering the SPS energy range. This paper presents differential inclusive spectra of transverse momentum, transverse mass and rapidity of $\pi ^{-}$ mesons produced in central${}^{40}$Ar+${}^{45}$Sc collisions at beam momenta of 13A, 19A, 30A, 40A, 75A and 150$A\,\text{ Ge }\text{ V }\!/\!\textit{c}$. [...] OpenAccess: PDF PDF (PDFA) (additional files);